| A.C. Bulwani Mixed Secondary | Day | Mixed |
| A.C.K Changara Secondary School | Day | Mixed |
| A.C.K Korisai Secondary School | Day | Mixed |
| A.C.K. Musoma Mixed Secondary School | Day | Mixed |
| Achiya Echakara High School, Kamuriai | Day | Mixed |
| Ack All Saint’S Simuli Secondary School | Day | Mixed |
| Ack Oduya Oprong Secondary School | Day | Mixed |
| Aedomoru Secondary School | Day | Mixed |
| Albert Ekirapa Secondary School | Day | Mixed |
| Alung’Oli Secondary School | Day | Mixed |
| Apokor High School | Day | Mixed |
| Apokor Sec | Day | Mixed |
| Asing’E Mixed Day Secondary School | Day | Mixed |
| Bishop King’Oo Okuleu Secondary School | Day | Mixed |
| Bns Sikoma Day Secondary | Day | Mixed |
| Bukoma Secondary School | Day | Mixed |
| Bulanda Secondary School | Day | Mixed |
| Bumala A C Secondary School | Day | Mixed |
| Bunyala Model Secondary School | Day | Mixed |
| Busia Township Secondary School | Day | Mixed |
| Busijo Secondary School | Day | Mixed |
| Bwaliro Girls | Day | Girls |
| Canon Awori Nambale Ac Sec. School | Day | Mixed |
| Chamasiri Secondary School | Day | Mixed |
| Elukhari Mixed Day Secondary | Day | Mixed |
| Esibembe Ac Girls Secondary School | Day | Girls |
| Fr Simon Mixed Secondary School Sibembe | Day | Mixed |
| Fr. Erapu Girls Sec | Day | Girls |
| Fr.Okodoi Sec | Day | Mixed |
| Ganjala Secondary School | Day | Mixed |
| Hakati Secondary School | Day | Mixed |
| Ikonnzo Secondary School | Day | Mixed |
| Kakurikit Secondary School | Day | Mixed |
| Katakwa Secondary School | Day | Mixed |
| Katanyu Secondary School | Day | Mixed |
| Katira Secondary School | Day | Mixed |
| Kekalet Secondary School | Day | Mixed |
| Khayo Secondary School | Day | Mixed |
| Madola Mixed Secondary School | Day | Mixed |
| Makunda Mixed Secondary School | Day | Mixed |
| Masebula Secondary School | Day | Mixed |
| Moding High School | Day | Mixed |
| Murende Mixed Secondary School | Day | Mixed |
| Muyafwa Secondary School | Day | Mixed |
| Nambale R.C Secondary School | Day | Mixed |
| Nambale Urban Secondary School | Day | Mixed |
| Namunyweda Mixed Day Secondary School | Day | Mixed |
| Nanderema Secondary School | Day | Boys |
| Nang’Oma Secondary School | Day | Mixed |
| Nyakhobi Secondary School | Day | Mixed |
| Nyakwaka Girls Secondary School | Day | Girls |
| Osieko Secondary School | Day | Mixed |
| Petter Habenga Okondo Sec | Day | Mixed |
| S.A Adanya Secondary School | Day | Mixed |
| Siera Girls Secondary School | Day | Girls |
| St Anne Angorom Girls Secondary School | Day | Girls |
| St Anthony Kolait Mixed Secondary School | Day | Mixed |
| St Jacob’S Kaliwa Sec | Day | Mixed |
| St James Kwang’Amor High. | Day | Mixed |
| St James Nasewa Secondary School | Day | Mixed |
| St John’S Kajei Secondary School | Day | Mixed |
| St Mark’S Among’Ura Secondary School | Day | Mixed |
| St Martin’S Mwari Secondary School | Day | Mixed |
| St Paul’S Bukhuma Secondary School | Day | Mixed |
| St Paul’S Kokare Secondary School | Day | Mixed |
| St Peters Busibi Girls Secondary School | Day | Girls |
| St Peters Ojaamong Secondary School | Day | Mixed |
| St Peter’S Igero Secondary School | Day | Mixed |
| St Peter’S Sirikhaya Secondary School | Day | Mixed |
| St Romanos Tingolo Sec | Day | Mixed |
| St. Alloys Buriya Secondary School | Day | Mixed |
| St. Andrews Mundulusia Mixed Secondary School | Day | Mixed |
| St. Augustine Kamolo Secondary School | Day | Mixed |
| St. Austin’S Kingandole High School | Day | Mixed |
| St. Brigit Namuduru Girls Secondary School | Day | Girls |
| St. Charles Lwanga Otimong Secondary School | Day | Mixed |
| St. Elizabeth Kabukui Secondary School | Day | Mixed |
| St. Francis Lupida Secondary School | Day | Mixed |
| St. Francis Okame Secondary School | Day | Mixed |
| St. Gabriel Wakhungu Secondary School | Day | Mixed |
| St. Ignatius Esirisia Secondary School | Day | Mixed |
| St. John The Baptist Mabale Secondary School | Day | Mixed |
| St. John’S Alupe Secondary School | Day | Mixed |
| St. Joseph’S Chakol Secondary School | Day | Mixed |
| St. Jude Onyunyur Secondary School | Day | Mixed |
| St. Kizito Muramba Secondary School | Day | Mixed |
| St. Luke’S Odiado Secondary School | Day | Mixed |
| St. Mark Ack Machakusi | Day | Mixed |
| St. Mark Bukiri Mixed Secondary School | Day | Mixed |
| St. Mark’S Maolo Secondary School | Day | Mixed |
| St. Mark’S Ngelechom Secondary School | Day | Mixed |
| St. Mary’S Burumba Secondary School | Day | Mixed |
| St. Mary’S Namabusi Sec | Day | Mixed |
| St. Mary’S Nambale Secondary School | Day | Mixed |
| St. Mary’S Siribo Mixed Sec. Sch. | Day | Mixed |
| St. Mathews Lwanyange Secondary School | Day | Mixed |
| St. Michael Buduma Girls | Day | Girls |
| St. Michael Secondary Buyende | Day | Mixed |
| St. Monica’S Butunyi Girls Secondary School | Day | Girls |
| St. Patrick’S Secondary School-Busibwabo | Day | Mixed |